Harmonic spectra of Coronene monomer and dimer
A
Keep the geometry of coronene but replace the dynamics by a simple
optimization.
Explore the deMon.out file and visualize the deMon.mol trajectory
B
Perform a frequency analysis on the last geometry (copy-past from
deMon.mol and remove OPTIMIZATION KEYWORD)
→ FREQUENCY
Visualise the harmonic spectrum with molden (Norm. Mod. button), and
the associated modes.
What are the active/inactive modes and why ?
C
Create the geometry of a coronene dimer with two superimposed
molecules. Add a dispersion correcion to the DFTB line :
→ DFTB SCC DISP
Perform an optimization of the dimer (without FREQUENCY analysis).
D
Compute the frequency analysis for the optimized dimer (copy and pas
the optimized geometry).
Visualize the vibrational modes with molden in order to identify the
inter- and intra (soft and hard) molecular modes and their position in
the spectrum.
Are their imaginary frequencies (represented by negative values ? What
does it mean ?)
E
Create a dimer in a twisted superimposed form.
Optimize and compute the normal mode analysis.
What can be said from this geometry ?
F (optional)
Create and explore larger clusters.
The solutions of the tutorial (input and output files) can be downloaded here : solutions
Next step : * Temperature evolution of the electronic spectra of cationic Methylene-Pyrene Isomers